Publications

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Micro Benchmarking, Performance Assertions and Sensitivity Analysis: A Technique for Developing Adaptive Grid Applications, Corey, I. R., Johnson J. R., and Vetter Jeffrey S. , Eleventh IEEE International Symp. High Performance Distributed Computing (HPDC), Edinburgh, Scotland, (2002)
A High Performance Programming Model for Large-Scale Molecular Dynamics Calculations on Reconfigurable Supercomputers, Cordova, Luis, Smith Melissa, Alam Sadaf, and Vetter Jeffrey S. , Workshop on High Performance Embedded Computing (HPEC), MIT Lincoln Laboratory, (2005)
Mathematical and Computational Enabling Technologies, Colella, P., Keyes D., Worley P. H., Candy J., Chacon L., Fann G., Gropp W., Kamath C., Pascucci V., Samtaney R., et al. , 2007 DOE Fusion Simulation Project Workshop Report, Washington, D.C., p.71–94, (2007)
Challenges in Programming SMP Clusters, Chow, Edmond, Hysom David, and Vetter Jeffrey S. , Tenth SIAM Conf. Parallel Processing, Portsmouth, VA, USA, (2001)
A Contract-Based System for Large Data Visualization, Childs, Hank, Brugger Eric S., Bonnell Kathleen S., Meredith Jeremy S., Miller Mark, Whitlock Brad J., and Max Nelson , Proceedings of IEEE Visualization 2005, p.190–198, (2005)
In Situ Processing, Childs, H., Ma K.-L., Yu H., Whitlock Brad J., Meredith Jeremy S., Favre Jean M., Klasky S., Podhorszki N., Schwan K., Wolf M., et al. , High Performance Visualization: Enabling Extreme-Scale Scientific Insight, Volume 1, Boca Raton, p.520, (2012)
VisIt: An End-User Tool for Visualization and Analyzing Very Large Data, Childs, Hank, Brugger Eric, Whitlock Brad J., Meredith Jeremy S., Ahern Sean, Bonnell Kathleen, Miller Mark, Weber Gunther H., Harrison Cyrus, Pugmire David, et al. , High Performance Visualization: Enabling Extreme-Scale Scientific Insight, Volume 1, Boca Raton, p.520, (2012)
Research Challenges for Visualization Software, Childs, Hank, Geveci Berk, Schroeder Will, Meredith Jeremy S., Moreland Kenneth, Sewell Christopher, Kuhlen Torsten, and Bethel E , Computer, Volume 46, Number 5, p.34–42, (2013)
LACIO: A New Collective I/O Strategy for Parallel I/O Systems, Chen, Y., Sun X. - H., Thakur R., Roth Philip C., and Gropp W. D. , 25th IEEE International Parallel & Distributed Processing Symposium, 5/2011, Anchorage, Alaska, (2011)
Using Pattern-Models to Guide SSD Deployment for Big Data Applications in HPC Systems, Chen, Junjie, Roth Philip C., and Chen Yong , 2013 IEEE International Conference on Big Data (IEEE BigData 2013), Santa Clara, California, USA, (2013)
Collective Prefetching for Parallel I/O Systems , Chen, Y., and Roth Philip C. , 5th Petascale Data Storage Workshop, 11/2010, New Orleans, LA, (2010)
Global-Aware and Multi-Order Context-Based Prefetching for High-Performance Processors, Chen, Y., Zhu H., Roth Philip C., Jin H., and Sun X. - H. , International Journal of High Performance Computing Applications, 11/2011, Volume 25, Issue 4, Number 4, p.355–370, (2011)
DOSAS: Mitigating the Resource Contention in Active Storage Systems, Chen, Chao, Chen Yong, and Roth Philip C. , IEEE Cluster 2012, 09/2012, (2012)
Toward a First-Principles Integrated Simulation of Tokamak Edge Plasmas, Chang, C. - S., Klasky S. A., Cummings J. C., Samtaney R., Shoshani A., Sugiyama L. E., Keyes D. E., Ku S. - H., Park G., Parker S. E., et al. , Journal of Physics: Conference Series, Volume 125, Issue 012042, (2008)
Integrated Particle Simulation of Neoclassical and Turbulence Physics in the Tokamak Pedestal/edge Region Using XGC, Chang, C. - S., Ku S. - H., Adams M. F., D'azevedo E. F., Chen Y., Cummings J. C., Ethier S., Greengard L., Hahm T. S., Hinton F. L., et al. , Fusion Energy 2006: Proceedings of the 21st IAEA Fusion Energy Conference, Chengdu, China, (2006)
Whole-Volume Integrated Gyrokinetic Simulation of Plasma Turbulence in Realistic Diverted-Tokamak Geometry, Chang, C. - S., Ku S. - H., Diamond P. H., Adams M. F., Barreto R. D., Chen Y., Cummings J. C., D'azevedo E. F., Dif-Pradalier G., Ethier S., et al. , Journal of Physics: Conference Series, Volume 180, (2009)
A Dynamic Tracing Mechanism for Performance Analysis of OpenMP Applications, Caubet, Jordi, Gimenez Judit, Labarta Jesus, DeRose Luiz, and Vetter Jeffrey S. , Workshop on OpenMP Applications and Tools (WOMPAT), West Lafayette, Indiana, USA, (2001)
First Results From Core-Edge Parallel Composition in the FACETS Project, Cary, J. R., Candy J., Cohen R. H., Krasheninnikov S., McCune D. C., Estep D. J., Larson J. W., Malony A. D., Pankin A. Y., Worley P. H., et al. , Journal of Physics: Conference Series, Volume 125, Issue 012040, (2008)
Introducing FACETS, the Framework Application for Core-Edge Transport Simulations, Cary, J. R., Candy J., Cohen R. H., Krasheninnikov S., McCune D. C., Estep D. J., Larson J. W., Malony A. D., Worley P. H., Carlsson J. A., et al. , Journal of Physics: Conference Series, Volume 78, Issue 012086, (2007)
Porting and Performance of the Community Climate System Model (CCSM3) on the Cray X1, Carr, G. R., Carpenter I. L., Cordery M. J., Drake J. B., Ham M. W., Hoffman F. M., and Worley P. H. , Proceedings of the 11th Workshop on High Performance Computing in Meteorology, Reading, United Kingdom, (2005)
Porting and Performance of the Community Climate System Model (CCSM3) on the Cray X1, Carr, G. R., Cordery M. J., Drake J. B., Ham M. W., Hoffman F. M., and Worley P. H. , Proceedings of the 47th Cray User Group Conference, May, Albuquerque, NM, (2005)
Durango: Scalable Synthetic Workload Generation for Extreme-Scale Application Performance Modeling and Simulation, Carothers, Christopher D., Meredith Jeremy S., Blanco Mark P., Vetter Jeffrey S., Mubarak Misbah, LaPre Justin, and Moore Shirley , Proceedings of the 2017 ACM SIGSIM Conference on Principles of Advanced Discrete Simulation, New York, NY, USA, (2017)
Speedup Properties of Phases in the Execution Profile of Distributed Parallel Programs, Carlson, B. M., Wagner T. D., Dowdy L. W., and Worley P. H. , Computer Performance Evaluation '92: Proceedings on the Sixth International Conference on Modelling Techniques and Tools, Edinburgh, Scotland, (1992)
Power Saving Experiments for Large-Scale Global Optimisation, Cao, Zhenwei, Easterling David, Watson Layne T., Li Dong, Cameron Kirk W., and Feng Wu-Chun , International Journal of Parallel, Emergent and Distributed Systems, (2010)